AT2G37700.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:vacuole 0.489 plasma membrane 0.473 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Fatty acid hydroxylase superfamily | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Fatty acid hydroxylase superfamily; FUNCTIONS IN: oxidoreductase activity, iron ion binding, catalytic activity; INVOLVED IN: oxidation reduction, fatty acid biosynthetic process; LOCATED IN: endoplasmic reticulum; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694), Uncharacterised protein, Wax2 C-terminal (InterPro:IPR021940); BEST Arabidopsis thaliana protein match is: Fatty acid hydroxylase superfamily (TAIR:AT1G02190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:15810581..15814176 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 70576.90 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.99 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.02 | ||||||||||||||||||||||||||||||||||||||||
| Length | 613 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MASRPGFLTD WPWTPLGSFK YLLLAPLVFD SIYSYATIRD HEKLLIVAVT VWRIVHSQIW ISLSRYQTAK GTKRILNKSI EFDQVDRERT WDDQIIFNTL 101: IVYLTKVYVS GTSTIPFWRT DGVILVALLH AGPVEFIYYW FHRALHHHFL YSRYHSHHHS SIVTEPITSV VHPFAEHIGY TLILGLPLIT TFMCGTVSVV 201: SIALYLTYID FMNNMGHCNF ELIPKFLFSL LPPLKFLCYT PSFHSLHHTQ FRTNYSLFMP MYDYIYGTTD ECSDSLYETS LEKEEEKPDA IHLTHLTSLD 301: SIYHLRLGFA SLSSHPLSSR CYLFLMKPFA LILSFILRSF SFQTFVVERN RFRDLTLHSH LLPKFSSHYM SHQQKECINK MIEAAILEAD KKGVKVMSLG 401: LLNQGEELNG YGEMYVRRHP KLKIRIVDGG SLAAEVVLHS IPVGTKEVLF RGQITKVARA IVFSLCQNAI KVMVLRKEEH SMLAEFLDDK CKENLIWLVG 501: DGLSTKEQKM AKDGTLFLPF SQFPPKTLRK DCFYHTTPAM IIPHSAQNID SCENWLGRRV MSAWRVGGIV HALEGWKEHE CGLDDNSIIN PPRVWEAALR 601: NGFQPLLLPS LET |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)