AT2G36920.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
|||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||
| Description (TAIR10) | protein_coding : | ||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||
| Computational Description (TAIR10) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02870.1); Has 13 Blast hits to 11 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||
| Coordinates (TAIR10) | chr2:+:15508838..15509488 | ||||||||||||||||||||
| Molecular Weight (calculated) | 24348.50 Da | ||||||||||||||||||||
| IEP (calculated) | 6.50 | ||||||||||||||||||||
| GRAVY (calculated) | -0.73 | ||||||||||||||||||||
| Length | 216 amino acids | ||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSFSDDCTSP SEKNRARTSQ EPRERPQDLS FLSSKVTEKQ IMSQEPFETS CSSVSPMNRD KEAFNSRHGP FSKNQNYFES NDITMNTENL LNPFHFGGGS 101: CGCAFLSTES MLCSFTVSGE EHGTNNSDTL GDPSNISLRC FGSIESILKV ARDGIEITMM PIPRLVNNAP QWTIKKRLTE HNVNPTYGQL RLPRSFFEQQ 201: IRGHLPEADL QKRTHC |
||||||||||||||||||||
| See Also |
|
||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)