AT2G33260.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.774 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Tryptophan/tyrosine permease | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Tryptophan/tyrosine permease; CONTAINS InterPro DOMAIN/s: Tryptophan/tyrosine permease (InterPro:IPR018227); BEST Arabidopsis thaliana protein match is: Tryptophan/tyrosine permease (TAIR:AT5G19500.1); Has 2832 Blast hits to 2825 proteins in 686 species: Archae - 20; Bacteria - 2600; Metazoa - 3; Fungi - 2; Plants - 103; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:14100840..14102252 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 46410.30 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 9.47 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.77 | ||||||||||||||||||||||||||||
| Length | 436 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDDLEITHET KKGKSFWAAV SLIIGTAVGP GMLGLPAATI RSGSIPSTIA LLCSWVYVIS SILLVAELSF AAMEEDNAAE VSFTGLATKS FGNKFGVFVA 101: FVYASLSFSL MVACVSGIGS IVSQWFPSMN PFLANAIFPL VSGILIGFFP FNAIDFTNRG LCFLMLFSIT SLVAIGLSVA RSNVLASFGQ SCWKVSMVLP 201: AVPVMVLTLG FHVITPFICN LAGDSVSDAR RAILVGGVVP LAMVLSWNLI VLGLARITVP AAPSSTIDPI SLLLSVNPSA LSAVQGFAFS ALATSLIGYA 301: VSFPKQLLDT WKLVSKQSNG NGRLGSVSFS SKERDRRTNG RASYNEPARA RDGFEAVVML FVLGVPALIA TFFPSTFSRA LDFAGVYANC FLFGVLPPAM 401: AYIQQSRKKL RPWVLPGGNF TLLILFAIAI ILGIWH |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)