AT2G32620.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.849 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cellulose synthase-like B | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
encodes a gene similar to cellulose synthase | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cellulose synthase-like B (CSLB02); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase-like B3 (TAIR:AT2G32530.1); Has 2453 Blast hits to 2315 proteins in 474 species: Archae - 14; Bacteria - 827; Metazoa - 0; Fungi - 7; Plants - 1588; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:13840744..13844324 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 84266.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.23 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.07 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 757 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MADSSCSLPP LYENISYKSY ILRAVDLTIL GLLFSLLLHR ILYMSQNGII WLVAFLCESC FSFVWLLSTC TKWSPAETKP YPDRLDERVY DLPSVDMFVP 101: TADPVREPPI MVVNTVLSLL AVNYPANKLA CYVSDDGCSP LTYFSLKEAS KFAKIWVPFC KKYNLKVRAP FRYFLNPFAA TEGSEFSRDW EMTKREYEKL 201: CRKVEDATGD SHLLGTDNEL EAFSNTKPND HSTIIKVVWE NKGGVGDEKE VPHIVYISRE KRPNYLHHYK AGAMNFLARV SGLMTNAPYM LNVDCDMYAN 301: EADVVRQAMC IFLQKSQNQN HCAFVQFPQE FYDSNTIKLT VIKSYMGRGI AGIQGPINVG SGCFHSRRVM YGLSPDELED NGSLSSVATR ELLAEDSLSS 401: GFGNSKEMVT SVVEALQRKP NPQNILTNSI EAAQEVGHCD YESQTSWGKT IGWLYDSMSE DMNTSIGIHS RGWTSSYIAP DPPAFLGSMP PGGLEAMIQQ 501: RRWATGSIEV LFNKQSPLLG LFCRKLRFRQ RVAYLCVSIC VRSIPELIYC LLPAYCLLHN SALFPKGLCL GITMLLAGMH CLYTLWEFMC LGHSIQSWYV 601: SQSFWRIVAT SSWLFSIFDI ILKLLGLSKN VFLVSKKTMP VETMSGSGIG PSQREDDGPN SGKTEFDGSL YFLPGTFIVL VNLAALVGVF VGLQRSSYSH 701: GGGGSGLGEA CACILVVMLF FPFLKGLFAK GKYGIPLSTL SKAGFLAVSF VVFSVGN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)