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AT2G11010.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT5G32590.1); Has 404 Blast hits to 390 proteins in 105 species: Archae - 10; Bacteria - 61; Metazoa - 184; Fungi - 25; Plants - 79; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink).
Protein Annotations
EMBL:AC006429EMBL:CP002685EnsemblPlants:AT2G11010EnsemblPlants:AT2G11010.1
entrez:815568GeneID:815568Gramene:AT2G11010.1hmmpanther:PTHR31420
hmmpanther:PTHR31420:SF9InterPro:IPR021704KEGG:ath:AT2G11010ncoils:Coil
Pfam:PF11690PIR:C84495Proteomes:UP000006548RefSeq:NP_178873.1
TAIR:AT2G11010UniGene:At.52707UniProt:Q9SKH6
Coordinates (TAIR10) chr2:+:4361869..4365919
Molecular Weight (calculated) 79576.70 Da
IEP (calculated) 6.37
GRAVY (calculated) -0.57
Length 693 amino acids
Sequence (TAIR10)
(BLAST)
001: MGRRRRSQQL SFTQSHSRRN HPLYIVHVAI FGWSRTFEQR SSLFYSTNFF FEHRIFLFST MNPDTERPES PSFNECGYSN DICTRPNDIA GPHYMSTCTL
101: QCLERLKELC RIPPEIMTES KMHGPMESPE DHRSGYFCVY EIYFKGCGLT FPFPEALLLS VRSSSKKTGY FSAYPNANRN LISHLPNKDE NWHQPWFLIK
201: KTLASIGNLS DVLPSKWSTK PAFIARTLST EEFIELFKIV FEGETLWNSF TRDRFIEANH KLRMSPPGQL HQLPPPPSLS QGTLARDLAS RWKVISKPMA
301: EACELTMVAP KGPDRPMRLG QHSVLNAMVV VLLGEKDIPV VTLLALLPEF AKRETDRLVA ALLPEGTNQR PGLLTDSVPE FENASYSMLT IHRGQKLEDQ
401: VDHLSSELME SNGELQDQYR RHDKLQDELS VAQDRLSESE SVAYTLNNQF TELKAKYKAI AKLRDAELAK SALKARKEVK GRRIELIQGA ILFIQTEKAR
501: SELESNIKEH ESNLLLLDQV HEEDFSEDPL FLSGDDFEPA GVLFPHTAFH FPPKDKKEAY DYMDKVVDKH RRLCDERQRL GLKRQTLEAR IARVERKVRE
601: MESDPFQWEL RNFDCVAKIP TMLWMYLRAR GQVLGLVNAH VEVVPSDSEE DDEEEDIDPS NCVKNEPKVD DKNEASTSNA ESAMKEHVPK PLP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)