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AT2G07240.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.649
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cysteine-type peptidases;cysteine-type peptidases
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
cysteine-type peptidases;cysteine-type peptidases; FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1985 (InterPro:IPR015410), Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JMFDeggNOG:ENOG41116ZHEMBL:CP002685EnsemblPlants:AT2G07240EnsemblPlants:AT2G07240.1entrez:815294GeneID:815294
GO:GO:0008234Gramene:AT2G07240.1hmmpanther:PTHR31470hmmpanther:PTHR31470:SF13InParanoid:F4IK98InterPro:IPR003653InterPro:IPR015410
KEGG:ath:AT2G07240OMA:ANEYEESPaxDb:F4IK98Pfam:PF02902Pfam:PF09331Pfscan:PS50600PRIDE:F4IK98
PROSITE:PS50600ProteinModelPortal:F4IK98Proteomes:UP000006548RefSeq:NP_178735.2SUPFAM:SSF54001TAIR:AT2G07240UniGene:At.41003
UniProt:F4IK98
Coordinates (TAIR10) chr2:-:3007102..3011701
Molecular Weight (calculated) 94607.00 Da
IEP (calculated) 4.90
GRAVY (calculated) -0.32
Length 874 amino acids
Sequence (TAIR10)
(BLAST)
001: MLKKRVVTDR EIRLRYACLA LVDGFLLPTS HYPKIIKDHA EMSEDLQGFL SYPWGRLSFE MMMTSIKERE VEQLATTCVA VQGLLYALQL VVLEAVPAIQ
101: EGPQIDEVVL SDSDAEAAAD VATRPGVALK LGNAKNVDSN CEAHVEPIIF PNARLNPVED LTWSDDEDGE RVDNMTGGKT KVVRGMKAQS NARPATGMRR
201: KNHGPIGEKG ESSSGVYFDA LSRMIDEKLK AQSEKILKGV IHWFTENLVV DPDNPKADKE AADGDHGPHT DKEVALGDNG LQADKETGGE EQNSNPVSSP
301: ESANEYEESD FNPIPPPRQP SSMQTDFTLP SFQGDQAISA VDDVVSFYNS VNVPTDPSGG ASNTNKTNKV QSGEEEVGVQ PEKNGNQQAD VDMVDDLNAG
401: RAHQADVEMV DDINAAMAEQ DVNMPSDGVA HPSSSTVSPP KSVTTENTAL GPDVAPDPLN PVAPLDPLPS VVVVATSVVA PNPPEESQDF AMFSSQIGSS
501: QPTHPSALPT QALKTASSPI TKLNDTPKVD NVSSVGASLI PNLPVTIVQR FFNPPPPSGG KLLAGKDGGG PDGDVNQGRK SKRPRTLSSK LDGRFHFDKK
601: TKLLVGHPSP FLSVGELASD PEVRYQRSLS KIKGKSSISI VGEASLSHKE IFDIIERKKH FSSKVMDVLI KFSRHLLRTD DIDGEKLRVD VLGSKFVSQL
701: TRLFPKFAKT LPPKDFIFPS ALVDLLIGAG ESNRVRLFAE ADCVYMPFNF DKKHWVSLCV DLKAHKITIL DSNIQLRRDA ALYAELQPLA AMLPYLFRQT
801: SSSSGDISLQ PFLLDRPHGI PQVSSPFDSG VLSVFLIHAH AVGGVEECME FDVVALDVEV KKLVSTIILS GVAS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)