AT1G62410.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 1.000 ASURE: cytosol What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : MIF4G domain-containing protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
MIF4G domain-containing protein; FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translation, RNA metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), MIF4-like, type 1/2/3 (InterPro:IPR016021); BEST Arabidopsis thaliana protein match is: MIF4G domain-containing protein / MA3 domain-containing protein (TAIR:AT5G57870.1); Has 925 Blast hits to 925 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 449; Fungi - 166; Plants - 147; Viruses - 0; Other Eukaryotes - 163 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:23092915..23093869 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 25669.00 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.21 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.07 | ||||||||||||||||||||||||||||||||
| Length | 223 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MANLCPFLSL QRLTTLIFDK AVLEPTFCPM YAQLCFDIRH KMPRFPPSAP KTDEISFKRV LLNTCQKVFE RTDDLSEEIR KMNAPDQEAE REDEVRLLNL 101: RTLGNLRFCG ELFLKRMLTE KVVLAIGQKL LEDAEQMCPS EEKIIAICLF LNTVGKKLDS LNSKLMNEIL RRLKNLSNHP QLVMSLRLMV GKIIHLHSIG 201: IKSDPINMWE DSKCGYILGI ISM |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)