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AT1G49150.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.602
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 6 Blast hits to 6 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:CP002684EnsemblPlants:AT1G49150EnsemblPlants:AT1G49150.1entrez:841338
GeneID:841338GO:GO:0016021Gramene:AT1G49150.1KEGG:ath:AT1G49150
PaxDb:F4I1N3Proteomes:UP000006548RefSeq:NP_175341.1STRING:3702.AT1G49150.1
TAIR:AT1G49150TMHMM:TMhelixUniGene:At.52088UniProt:F4I1N3
Coordinates (TAIR10) chr1:+:18178577..18179023
Molecular Weight (calculated) 16580.60 Da
IEP (calculated) 5.00
GRAVY (calculated) 0.33
Length 148 amino acids
Sequence (TAIR10)
(BLAST)
001: MDNKSATKAE ASPSVIKDTT PTDNLEKDKK DMTTEMKISD AMEMLEGFGI RLHKMEEKMD LLISLFRSNN EVKIGSVKPR QRACLWMDHL LMRNLIAVLV
101: LLSLVLVVVV VFSSVVVFPV VVVAVKAFVD VPVEVLVAEE ETYFCYSA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)