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AT1G28327.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 0.572
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 52 Blast hits to 52 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JIF7eggNOG:ENOG4111DGHEMBL:CP002684EnsemblPlants:AT1G28327
EnsemblPlants:AT1G28327.1entrez:839728GeneID:839728Gramene:AT1G28327.1
KEGG:ath:AT1G28327OMA:CEMYVAPPaxDb:F4HWK6PRIDE:F4HWK6
ProteinModelPortal:F4HWK6Proteomes:UP000006548RefSeq:NP_174154.2TAIR:AT1G28327
UniGene:At.51181UniProt:F4HWK6
Coordinates (TAIR10) chr1:+:9932120..9933195
Molecular Weight (calculated) 31293.50 Da
IEP (calculated) 8.43
GRAVY (calculated) -0.66
Length 274 amino acids
Sequence (TAIR10)
(BLAST)
001: MTSSFFKQGQ ASYMQTLKRQ AKVDSGKRMS TNFVIRRDPT GQCIFRPIPF KGMRKVRKHV DDDEGWSGGS KKVKVRGLTS SSGDGDSLSY PFENETTIRN
101: REKDRLMLEI FGPESTDDSD ESGTEEEFME TNLMSLVSLQ WGKRGKRSMR KGTWKRHILE NHVGQHKNTQ DEMDIQVLLV SMDASVIPNL QNPQVSCKPN
201: VTLKSLCEMY VAPYVEAQAE KIEMYVVKEL VAELTMIDPH RDRVEIVNKE DSVGGLRMYN FNNGYVIIGY MKTP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)