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AT1G19090.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 0.908
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : receptor-like serine/threonine kinase 2
Curator
Summary (TAIR10)
receptor-like serine/threonine kinase (RKF2)
Computational
Description (TAIR10)
receptor-like serine/threonine kinase 2 (RKF2); FUNCTIONS IN: receptor signaling protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (TAIR:AT5G40380.1); Has 112374 Blast hits to 111073 proteins in 3970 species: Archae - 108; Bacteria - 13388; Metazoa - 41005; Fungi - 9087; Plants - 31953; Viruses - 460; Other Eukaryotes - 16373 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G19090-MONOMERBioGrid:23730EC:2.7.11.1eggNOG:COG0515eggNOG:ENOG410J960EMBL:AC068602EMBL:AF024649
EMBL:CP002684EnsemblPlants:AT1G19090EnsemblPlants:AT1G19090.1entrez:838491Gene3D:2.60.120.200GeneID:838491Genevisible:Q9LMB9
GO:GO:0004674GO:GO:0005524GO:GO:0016021Gramene:AT1G19090.1hmmpanther:PTHR27002hmmpanther:PTHR27002:SF121InParanoid:Q9LMB9
InterPro:IPR000719InterPro:IPR002902InterPro:IPR008271InterPro:IPR011009InterPro:IPR013320KEGG:ath:AT1G19090PaxDb:Q9LMB9
Pfam:PF00069Pfam:PF01657Pfam:PF07714Pfam:Q9LMB9Pfscan:PS50011Pfscan:PS51473PhylomeDB:Q9LMB9
PRIDE:Q9LMB9PRO:PR:Q9LMB9PROSITE:PS00108PROSITE:PS50011PROSITE:PS51473ProteinModelPortal:Q9LMB9Proteomes:UP000006548
RefSeq:NP_564071.3scanprosite:PS00108SMART:SM00220SMR:Q9LMB9STRING:3702.AT1G19090.1SUPFAM:SSF56112TAIR:AT1G19090
tair10-symbols:CRK1tair10-symbols:RKF2TMHMM:TMhelixUniGene:At.10822UniProt:Q9LMB9
Coordinates (TAIR10) chr1:+:6590350..6592615
Molecular Weight (calculated) 67653.00 Da
IEP (calculated) 7.16
GRAVY (calculated) -0.13
Length 600 amino acids
Sequence (TAIR10)
(BLAST)
001: MQICASIAQF LAWVSFLVLL ATVGSSSSSE SLLNCQPLDH HLVNPSRLLG FLRAMSSVND FITNDKLWVV SSITDVSPPI YVFLQCREDL SVSDCRHCFN
101: ESRLELERKC SGSGGRIHSD RCFLRFDDRD FSEEFVDPTF DKANCEETGT GFGEFWRFLD EALVNVTLKA VKNGGFGAAS VIKTEAVYAL AQCWQTLDEN
201: TCRECLVNAR SSLRACDGHE ARAFFTGCYL KYSTHKFFDD AAEHKPDADQ RNFIRSSFFP HLSDRDVTRL AIAAISLSIL TSLGAFISYR RVSRKRKAQV
301: PSCVNFKYEM LEKATESFHD SMKLGQGGAV KKLFFNTREW ADQFFNEVNL ISGVQHKNLV RLLGCSIEGP KSLLVYEYVH NRSLDQILFM KNTVHILSWK
401: QRFNIIIGIS EGLEYLHRGS EVKIIHRDIK TSNILLDRNL SPKIADFGLI RSMGTDKTQT NTGIAGTLGY LAPEYLIKGQ LTEKADVYAF GVLIIEIVTG
501: KKNNAFTQGT SSVLYSVWEH FKANTLDRSI DPRLKGSFVE EEALKVLQIG LLCVQSSVEL RPSMSEIVFM LQNKDSKFEY PKQPPFLSAS VLMPDEETRV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)