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AT5G37610.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 0.955
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : Eukaryotic porin family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Eukaryotic porin family protein; FUNCTIONS IN: voltage-gated anion channel activity; INVOLVED IN: anion transport, transmembrane transport; LOCATED IN: mitochondrial outer membrane, endomembrane system; CONTAINS InterPro DOMAIN/s: Porin, eukaryotic type (InterPro:IPR001925); BEST Arabidopsis thaliana protein match is: voltage dependent anion channel 1 (TAIR:AT3G01280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioGrid:18990eggNOG:ENOG410ZBK1eggNOG:KOG3126EMBL:AB018107
EMBL:CP002688EnsemblPlants:AT5G37610EnsemblPlants:AT5G37610.1entrez:833739
Gene3D:2.40.160.10GeneID:833739Genevisible:Q9FHQ9GO:GO:0005741
GO:GO:0055085Gramene:AT5G37610.1hmmpanther:PTHR11743InParanoid:Q9FHQ9
InterPro:IPR023614InterPro:IPR027246KEGG:ath:AT5G37610PaxDb:Q9FHQ9
Pfam:PF01459Pfam:Q9FHQ9PhylomeDB:Q9FHQ9PRIDE:Q9FHQ9
ProteinModelPortal:Q9FHQ9Proteomes:UP000006548RefSeq:NP_198577.1STRING:3702.AT5G37610.1
TAIR:AT5G37610UniGene:At.51071UniProt:Q9FHQ9
Coordinates (TAIR10) chr5:+:14938121..14938612
Molecular Weight (calculated) 18262.90 Da
IEP (calculated) 9.59
GRAVY (calculated) 0.11
Length 163 amino acids
Sequence (TAIR10)
(BLAST)
001: MLSERARIST IVGLFANPIL SFSAVFGNDF WRFGFELTLD LVNRIITKAN TVLSLITEDT TTTFSIDKKA SLFTASYYQR LHSKTVCGAE AKYILSDKSN
101: SFSIGKRHLF GDDDLIQALL SVSNGGSMRV LFQHHWTLKS FFTIAGERLL NHSSQRFGLA VEL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)