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AT5G26805.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
nucleus 0.996
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JIV8eggNOG:ENOG411188VEMBL:AF007270EMBL:BT029433
EMBL:CP002688EnsemblPlants:AT5G26805EnsemblPlants:AT5G26805.1entrez:2746007
GeneID:2746007GO:GO:0003677GO:GO:0005634GO:GO:0006351
GO:GO:0006355Gramene:AT5G26805.1hmmpanther:PTHR34269HOGENOM:HOG000131641
InParanoid:Q3E922KEGG:ath:AT5G26805OMA:EIRPIAYPaxDb:Q3E922
Pfam:Q3E922PhylomeDB:Q3E922PRO:PR:Q3E922ProteinModelPortal:Q3E922
Proteomes:UP000006548RefSeq:NP_974841.1TAIR:AT5G26805UniGene:At.49761
UniProt:Q3E922
Coordinates (TAIR10) chr5:+:9427548..9428018
Molecular Weight (calculated) 18769.70 Da
IEP (calculated) 6.12
GRAVY (calculated) -0.41
Length 156 amino acids
Sequence (TAIR10)
(BLAST)
001: MIKSLFYTFL QTKHQEESNN SRDPNYPLFP QEIEIRPIAY FPWEIIKTLT TDEIISKFQL PMEKIRDTML RHASEEDIYR TKFMSCETNI LVKDLDTNTI
101: HQGKLWKHPC ENNFALRESW IEEFVKRRRL VVGMVVGMYW DFEACMFCFS VLDGRQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)