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AT5G10220.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.998
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : annexin 6
Curator
Summary (TAIR10)
Encodes a calcium-binding protein annexin (AnnAt6).
Computational
Description (TAIR10)
annexin 6 (ANN6); FUNCTIONS IN: calcium-dependent phospholipid binding, calcium ion binding; INVOLVED IN: response to red or far red light, response to water deprivation, response to salt stress, response to cold, response to heat; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Annexin like protein (InterPro:IPR015472), Annexin repeat (InterPro:IPR018502), Annexin repeat, conserved site (InterPro:IPR018252), Annexin (InterPro:IPR001464), Annexin, type plant (InterPro:IPR009118); BEST Arabidopsis thaliana protein match is: annexin 7 (TAIR:AT5G10230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioGrid:16164eggNOG:ENOG410XPUNeggNOG:KOG0819EMBL:AK175572
EMBL:AK175641EMBL:AK175892EMBL:AL356332EMBL:AY014798
EMBL:CP002688EMBL:DQ446938EMBL:DQ653279EnsemblPlants:AT5G10220
EnsemblPlants:AT5G10220.1entrez:830886Gene3D:1.10.220.10GeneID:830886
Genevisible:Q9LX08GO:GO:0005509GO:GO:0005544GO:GO:0009408
GO:GO:0009409GO:GO:0009414GO:GO:0009639GO:GO:0009651
Gramene:AT5G10220.1hmmpanther:PTHR10502hmmpanther:PTHR10502:SF98HOGENOM:HOG000158802
InParanoid:Q9LX08InterPro:IPR001464InterPro:IPR009118InterPro:IPR018252
InterPro:IPR018502KEGG:ath:AT5G10220OMA:LNHFKDKPaxDb:Q9LX08
Pfam:PF00191Pfam:Q9LX08PhylomeDB:Q9LX08PIR:T50026
PRIDE:Q9LX08PRINTS:PR00196PRINTS:PR01814PRO:PR:Q9LX08
PROSITE:PS00223ProteinModelPortal:Q9LX08Proteomes:UP000006548RefSeq:NP_196584.1
scanprosite:PS00223SMART:SM00335SMR:Q9LX08STRING:3702.AT5G10220.1
SUPFAM:SSF47874TAIR:AT5G10220tair10-symbols:ANN6tair10-symbols:ANNAT6
UniGene:At.1635UniGene:At.32405UniProt:Q9LX08
Coordinates (TAIR10) chr5:-:3206980..3208784
Molecular Weight (calculated) 36571.70 Da
IEP (calculated) 8.19
GRAVY (calculated) -0.48
Length 318 amino acids
Sequence (TAIR10)
(BLAST)
001: MASLKIPANI PLPEEDSEQL HKAFKGWGTN EGMIISILAH RNATQRSFIR AVYAANYNKD LLKELDGELS GDFERVVMLW TLDPTERDAY LANESTKLFT
101: KNIWVLVEIA CTRPSLEFFK TKQAYHVRYK TSLEEDVAYH TSGNIRKLLV PLVSTFRYDG NADEVNVKLA RSEAKTLHKK ITEKAYTDED LIRILTTRSK
201: AQINATLNHF KDKFGSSINK FLKEDSNDDY VQLLKTAIKC LTYPEKYFEK VLRRAINRMG TDEWALTRVV TTRAEVDLER IKEEYLRRNS VPLDRAIAND
301: TSGDYKDMLL ALLGHDHA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)