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AT5G09470.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : dicarboxylate carrier 3
Curator
Summary (TAIR10)
Encodes one of the mitochondrial dicarboxylate carriers (DIC): DIC1 (AT2G22500), DIC2 (AT4G24570), DIC3 (AT5G09470).
Computational
Description (TAIR10)
dicarboxylate carrier 3 (DIC3); FUNCTIONS IN: oxidative phosphorylation uncoupler activity, binding, dicarboxylic acid transmembrane transporter activity; INVOLVED IN: transport, mitochondrial transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: cotyledon, leaf, stamen; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, LP.10 ten leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: dicarboxylate carrier 2 (TAIR:AT4G24570.1); Has 24086 Blast hits to 12932 proteins in 445 species: Archae - 0; Bacteria - 4; Metazoa - 10227; Fungi - 7035; Plants - 4424; Viruses - 3; Other Eukaryotes - 2393 (source: NCBI BLink).
Protein Annotations
BioGrid:16084eggNOG:ENOG410XQHUeggNOG:KOG0759EMBL:AL391712
EMBL:AM236861EMBL:BT033087EMBL:CP002688EnsemblPlants:AT5G09470
EnsemblPlants:AT5G09470.1entrez:830806Gene3D:1.50.40.10GeneID:830806
Genevisible:Q9FY68GO:GO:0003735GO:GO:0005310GO:GO:0005743
GO:GO:0006412GO:GO:0006835GO:GO:0006839GO:GO:0016021
Gramene:AT5G09470.1hmmpanther:PTHR24089hmmpanther:PTHR24089:SF392HOGENOM:HOG000165139
InParanoid:Q9FY68InterPro:IPR002067InterPro:IPR018108InterPro:IPR023395
KEGG:ath:AT5G09470OMA:LYSATRMPaxDb:Q9FY68Pfam:PF00153
Pfam:Q9FY68Pfscan:PS50920PhylomeDB:Q9FY68PRIDE:Q9FY68
PRINTS:PR00926PRO:PR:Q9FY68PROSITE:PS50920ProteinModelPortal:Q9FY68
Proteomes:UP000006548Reactome:R-ATH-1614517Reactome:R-ATH-428643Reactome:R-ATH-70263
RefSeq:NP_196509.1SMR:Q9FY68STRING:3702.AT5G09470.1SUPFAM:0048588
SUPFAM:SSF103506TAIR:AT5G09470tair10-symbols:DIC3UniGene:At.65498
UniProt:Q9FY68
Coordinates (TAIR10) chr5:-:2949241..2950513
Molecular Weight (calculated) 36098.30 Da
IEP (calculated) 10.23
GRAVY (calculated) 0.20
Length 337 amino acids
Sequence (TAIR10)
(BLAST)
001: MGFKPFLEGG IAAIIAGALT HPLDLIKVRM QLQGEHSFSL DQNPNPNLSL DHNLPVKPYR PVFALDSLIG SISLLPLHIH APSSSTRSVM TPFAVGAHIV
101: KTEGPAALFS GVSATILRQM LYSATRMGIY DFLKRRWTDQ LTGNFPLVTK ITAGLIAGAV GSVVGNPADV AMVRMQADGS LPLNRRRNYK SVVDAIDRIA
201: RQEGVSSLWR GSWLTVNRAM IVTASQLATY DHVKEILVAG GRGTPGGIGT HVAASFAAGI VAAVASNPID VVKTRMMNAD KEIYGGPLDC AVKMVAEEGP
301: MALYKGLVPT ATRQGPFTMI LFLTLEQVRG LLKDVKF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)