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AT4G25950.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
vacuole 1.000
ASURE: vacuole
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : vacuolar ATP synthase G3
Curator
Summary (TAIR10)
V-ATPase G-subunit like protein
Computational
Description (TAIR10)
vacuolar ATP synthase G3 (VATG3); FUNCTIONS IN: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances; INVOLVED IN: proton transport; LOCATED IN: vacuole; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Vacuolar (H+)-ATPase G subunit (InterPro:IPR005124); BEST Arabidopsis thaliana protein match is: vacuolar membrane ATPase 10 (TAIR:AT3G01390.2); Has 543 Blast hits to 543 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 270; Fungi - 119; Plants - 123; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink).
Protein Annotations
BioGrid:13988eggNOG:ENOG4111XX0eggNOG:KOG1772EMBL:AL049483
EMBL:AL161564EMBL:AY063859EMBL:AY091217EMBL:CP002687
EnsemblPlants:AT4G25950EnsemblPlants:AT4G25950.1entrez:828701GeneID:828701
Genevisible:Q9SZH0GO:GO:0005773GO:GO:0015992GO:GO:0016471
GO:GO:0016820Gramene:AT4G25950.1hmmpanther:PTHR12713hmmpanther:PTHR12713:SF14
HOGENOM:HOG000186416InParanoid:Q9SZH0InterPro:IPR005124KEGG:ath:AT4G25950
KO:K02152ncoils:CoilOMA:KYITTIKPANTHER:PTHR12713
PaxDb:Q9SZH0Pfam:PF03179Pfam:Q9SZH0PhylomeDB:Q9SZH0
PIR:T04250PRIDE:Q9SZH0PRO:PR:Q9SZH0ProteinModelPortal:Q9SZH0
Proteomes:UP000006548RefSeq:NP_194325.1SMR:Q9SZH0STRING:3702.AT4G25950.1
TAIR:AT4G25950tair10-symbols:VATG3TCDB:3.A.2.2.5TIGRfam:TIGR01147
TIGRFAMs:TIGR01147UniGene:At.27175UniProt:Q9SZH0
Coordinates (TAIR10) chr4:-:13173815..13174324
Molecular Weight (calculated) 12116.30 Da
IEP (calculated) 4.82
GRAVY (calculated) -0.80
Length 108 amino acids
Sequence (TAIR10)
(BLAST)
001: MDSLRGQGGI QMLLTAEQEA GRIVSAARTA KLARMKQAKD EAEKEMEEYR SRLEEEYQTQ VSGTDQEADA KRLDDETDVR ITNLKESSSK VSKDIVKMLI
101: KYVTTTAA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)