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AT4G25225.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 0.939
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35736.2); Has 78 Blast hits to 78 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J3F7eggNOG:ENOG410Y5J2EMBL:CP002687EMBL:DQ487605
EnsemblPlants:AT4G25225EnsemblPlants:AT4G25225.1entrez:5008162GeneID:5008162
Gramene:AT4G25225.1hmmpanther:PTHR33528hmmpanther:PTHR33528:SF1InterPro:IPR027854
KEGG:ath:AT4G25225OMA:HCAVSMAPfam:PF15054PhylomeDB:Q1G3H9
Proteomes:UP000006548RefSeq:NP_001078445.1TAIR:AT4G25225UniGene:At.68653
UniProt:Q1G3H9
Coordinates (TAIR10) chr4:-:12923086..12923256
Molecular Weight (calculated) 6310.81 Da
IEP (calculated) 9.98
GRAVY (calculated) -0.16
Length 56 amino acids
Sequence (TAIR10)
(BLAST)
1: MGIIRSSFSF IMGTVCGIYI AQTYNVPNIK KLGHCAVSMA KQVEEKYRKP KSRDDV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)