AT4G04760.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.940 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Major facilitator superfamily protein | ||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: leaf whorl, sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), Sugar/inositol transporter (InterPro:IPR003663), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT4G04750.1); Has 23023 Blast hits to 22536 proteins in 1742 species: Archae - 399; Bacteria - 9001; Metazoa - 4095; Fungi - 6023; Plants - 2554; Viruses - 0; Other Eukaryotes - 951 (source: NCBI BLink). | ||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:2424164..2427769 | ||||||||||||
| Molecular Weight (calculated) | 50715.60 Da | ||||||||||||
| IEP (calculated) | 4.46 | ||||||||||||
| GRAVY (calculated) | 0.59 | ||||||||||||
| Length | 467 amino acids | ||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAEEGLLLPA SSTSSSSSLL SEISNACTRP FVLAFIVGSC GAFAFGCIIG YSAPTQTSIM KDLNLSIADA IFTIWIDIDG GVNPWSINLW ETIWITNILF 101: VIGWFAIAFA KGVWLLDLGR LLQGISIGIS VYLGPVYITE IAPRNLRGAA SSFAQLFAGV GISVFYALGT IVAWRNLAIL GCIPSLMVLP LLFFIPESPR 201: WLAKVGREME VEAVLLSLRG EKSDVSDEAA EILEYTEHVK QQQDIDDRGF FKLFQRKYAF SLTIGVVLIA LPQLGGLNGY SFYTDSIFIS TGVSSDFGFI 301: STSVVQMFGG ILGTVLVDVS GRRFSSWNVL GLSYHSHFIL LEGMENHCWE TGTPVLALFS VMVYFGSYGS GMGSIPWIIA SEIYPVDVKG AAGTMCNLVS 401: SISAWLVAYS FSYLLQWSST GTFLMFATVA GLGFVFIAKL VPETKGKSLE EIQSLFTDSP PQDSTIF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)