AT4G01260.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : DNA-binding storekeeper protein-related transcriptional regulator | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
DNA-binding storekeeper protein-related transcriptional regulator; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592); BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related transcriptional regulator (TAIR:AT4G25210.1); Has 1175 Blast hits to 958 proteins in 167 species: Archae - 0; Bacteria - 77; Metazoa - 317; Fungi - 112; Plants - 260; Viruses - 0; Other Eukaryotes - 409 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:528570..529547 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 36225.70 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 9.72 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.91 | ||||||||||||||||||||||||||||
| Length | 325 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAPKQLKKIE NPVVSSSEEE ESASSGESAT SGEESDSSAD SPVKESSKKP VVVSKPSGSK TTTKPESSTA AKRSFEKTDE MSKKKSKNSM GEEDVKKKDE 101: TLKKNLFVRL FTEEDEAILL QGFLDFATKK ENPSDHIDDF YESIKNSISF DVTKPQLVTK IGNLKKKFNG RVSKGLKKGK NEEVMVFSKA SDQNCFDLSR 201: KIWGSNGVLY SKSKNMRQVQ LGGSVKVDED DQEPQKHRFV ISTLSSGQEL VSYLKVENPN SLGVDDTKWS AKLDKIKDGK QKRKMEKNLK KIQAKEEELS 301: MMRSEFVAAV TNVLSKQDNA SYSCK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)