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AT4G00860.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Predictors External Curations
AmiGO : mitochondrion 14671022
AmiGO : mitochondrion 16618929
AmiGO : plastid 16618929
TAIR : mitochondrion 14671022
TAIR : plastid 16618929
TAIR : peroxisome 17951448
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31975158 (2020): plastid
  • PMID:31911558 (2020): mitochondrion
  • PMID:31871212 (2020): mitochondrion
  • PMID:31818904 (2020): mitochondrion
  • PMID:31673584 (2019): extracellular region plant-type cell wall
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:31520498 (2020): mitochondrion
  • PMID:31023727 (2019): mitochondrion
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27943495 (2017): mitochondrion
  • PMID:27122571 (2016): mitochondrion
  • PMID:23750852 (2013): mitochondrion
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:22923678 (2012): mitochondrion
  • PMID:22574745 (2012): mitochondrion
  • PMID:22550958 (2012): plastid
  • PMID:21988472 (2012): plant-type vacuole plant-type vacuole membrane
  • PMID:21896887 (2011): mitochondrion mitochondrial envelope mitochondrial outer membrane
  • PMID:21841088 (2011): mitochondrion
  • PMID:20061580 (2010): plastid
  • PMID:19334764 (2009): plasma membrane
  • PMID:17951448 (2007): peroxisome
  • PMID:16618929 (2006): unclear
  • PMID:15604729 (2004): mitochondrion
  • PMID:14671022 (2004): mitochondrion
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein of unknown function (DUF1138)
Curator
Summary (TAIR10)
putative pathogenesis-related protein whose transcript level is induced in response to ozone and pathogenic Pseudomonas strains.
Computational
Description (TAIR10)
ATOZI1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to reactive oxygen species, response to bacterium, response to ozone; LOCATED IN: mitochondrion, peroxisome, plastid, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1138 (InterPro:IPR009515); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1138) (TAIR:AT1G01170.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J14XeggNOG:ENOG410YZCAEMBL:AF013294EMBL:AL161472
EMBL:AY093001EMBL:AY114604EMBL:CP002687EMBL:U20347
EnsemblPlants:AT4G00860EnsemblPlants:AT4G00860.1entrez:826213GeneID:826213
GO:GO:0000302GO:GO:0005739GO:GO:0005777GO:GO:0009536
GO:GO:0009617GO:GO:0010193GO:GO:0016020Gramene:AT4G00860.1
hmmpanther:PTHR34267hmmpanther:PTHR34267:SF1HOGENOM:HOG000239250InterPro:IPR009515
KEGG:ath:AT4G00860OMA:FAVAYICPfam:PF06592PhylomeDB:Q38842
PIR:S59544Proteomes:UP000006548RefSeq:NP_191995.1STRING:3702.AT4G00860.1
TAIR:AT4G00860tair10-symbols:AT0ZI1tair10-symbols:ATOZI1UniGene:At.23328
UniProt:Q38842
Coordinates (TAIR10) chr4:-:359548..359868
Molecular Weight (calculated) 8606.37 Da
IEP (calculated) 9.23
GRAVY (calculated) -0.06
Length 80 amino acids
Sequence (TAIR10)
(BLAST)
1: MSRATYIIGA LAGSAVVAYV CDKVISDDKL FGGTTPGTIT NKEWGAATEE RLQAWPRVAG PPVVMNPISR QNFIVKSRPE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)