AT3G26190.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:endoplasmic reticulum 0.862 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : cytochrome P450, family 71, subfamily B, polypeptide 21 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
putative cytochrome P450 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
cytochrome P450, family 71, subfamily B, polypeptide 21 (CYP71B21); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 22 (TAIR:AT3G26200.1); Has 32895 Blast hits to 32599 proteins in 1663 species: Archae - 46; Bacteria - 3045; Metazoa - 12074; Fungi - 6934; Plants - 9668; Viruses - 3; Other Eukaryotes - 1125 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr3:-:9583475..9585083 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 56987.60 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 6.92 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.02 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 499 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MSIFLCFLLL LPLFLVFYKR LLPSKGKLPP GPISLPIIGN LHQLGKSLHR SFYKLSQEYG PVMFLRFGVV PVVVFSTKEA AEEVLKTHDL ETCTRPKLSA 101: TGLFTYNFKD IGFAQYGEDW REMRKLAMLE LFSSKKLKAF RYIREEESEL LVKKVTESAQ TQTLVDLRKA LFSYTASIVC RLAFGQNFHE CDFVDMDKVE 201: ELVLESETNL GSFAFIDFFP AGLGWAIDRI SGQHSRLHKA FARLSNFFQH VIDDHLKPWQ SEDHSDIVGV MLDMINKESK VGSFKVTYDH LKGVMSDVFL 301: AGVNAGAITM IWALTELTRH PRVMKKLQQE IRELLGDNKE KITEQDLEKV HYLKLVIQET FRLHPPAPLL LPRETMSDVK IQGYNIPKNT MIEINTYAIG 401: RDPNCWTNPN EFIPERFVDS PIDYKGQHFE LLPFGGGRRI CPGMATGMTI VELGLLNVLY FFDWSLPYGM AIADINMEEA GAFVIAKKVP LELVPVLHY |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)