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AT3G17300.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 48 Blast hits to 48 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IYT4eggNOG:ENOG41124WSEMBL:AY059890EMBL:AY088789
EMBL:AY093377EMBL:CP002686EnsemblPlants:AT3G17300EnsemblPlants:AT3G17300.1
entrez:820993ExpressionAtlas:Q93XW8GeneID:820993Gramene:AT3G17300.1
hmmpanther:PTHR13166hmmpanther:PTHR13166:SF13HOGENOM:HOG000005694InterPro:IPR008011
OMA:LHESEKMPfam:PF05347Pfam:PF13232PhylomeDB:Q93XW8
Proteomes:UP000006548RefSeq:NP_566572.1STRING:3702.AT3G17300.1TAIR:AT3G17300
UniGene:At.23704UniProt:Q93XW8
Coordinates (TAIR10) chr3:+:5907616..5908695
Molecular Weight (calculated) 10431.80 Da
IEP (calculated) 10.72
GRAVY (calculated) -0.68
Length 91 amino acids
Sequence (TAIR10)
(BLAST)
1: MPSLQTSLPP ELANNVVRLY RECLRRAKFI GKQQHNTELV VGMVRQQFKK HMNETDPEKI QKLKDDAARG LINHMLFESA KLTGGKVSQR S
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)