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AT3G10620.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31541795 (2020): plasma membrane
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:22318864 (2012): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : nudix hydrolase homolog 26
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
nudix hydrolase homolog 26 (NUDX26); CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase (InterPro:IPR020476), NUDIX hydrolase, conserved site (InterPro:IPR020084), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 27 (TAIR:AT5G06340.1); Has 4741 Blast hits to 4739 proteins in 1213 species: Archae - 2; Bacteria - 2928; Metazoa - 13; Fungi - 1; Plants - 97; Viruses - 0; Other Eukaryotes - 1700 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G10620-MONOMEREC:3.6.1.-eggNOG:COG0494eggNOG:ENOG410IGW6
EMBL:AC011560EMBL:AC013428EMBL:AF370187EMBL:AY059145
EMBL:CP002686EnsemblPlants:AT3G10620EnsemblPlants:AT3G10620.1entrez:820231
Gene3D:3.90.79.10GeneID:820231Genevisible:Q9CAF2GO:GO:0006753
GO:GO:0008893GO:GO:0009507GO:GO:0034432GO:GO:0046872
Gramene:AT3G10620.1HAMAP:MF_00298hmmpanther:PTHR11839hmmpanther:PTHR11839:SF13
HOGENOM:HOG000066722InParanoid:Q9CAF2InterPro:IPR000086InterPro:IPR015797
InterPro:IPR020084InterPro:IPR020476InterPro:IPR022927KEGG:ath:AT3G10620
OMA:IILINARPaxDb:Q9CAF2Pfam:PF00293Pfam:Q9CAF2
Pfscan:PS51462PhylomeDB:Q9CAF2PRIDE:Q9CAF2PRINTS:PR00502
PRO:PR:Q9CAF2PROSITE:PS00893PROSITE:PS51462ProteinModelPortal:Q9CAF2
Proteomes:UP000006548RefSeq:NP_187673.1scanprosite:PS00893SMR:Q9CAF2
STRING:3702.AT3G10620.1SUPFAM:SSF55811TAIR:AT3G10620tair10-symbols:ATNUDX26
tair10-symbols:NUDX26UniGene:At.19953UniGene:At.69665UniProt:Q9CAF2
Coordinates (TAIR10) chr3:+:3320263..3321565
Molecular Weight (calculated) 24618.30 Da
IEP (calculated) 8.33
GRAVY (calculated) -0.54
Length 216 amino acids
Sequence (TAIR10)
(BLAST)
001: MALYRPLLLH HPTSPSVTTF LRNYPSKPIK FSSLPFLHRC RKSRVSSSSA RCCSSMESPP EGYRRNVGVC LMNSSKKIFT ASRLDIPSAW QMPQGGIDEG
101: EDPRVAVMRE LKEETGVHSA EILAEAPHWI TYDFPPDVRE KLKVRWGSDW KGQAQKWFLL KFTGKDEEIN LLGDGTEKPE FGEWSWTSPD QVVENAVEFK
201: KPVYKEVMSA FASHLQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)