AT2G20825.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:nucleus 0.995 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Developmental regulator, ULTRAPETALA | ||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
ULTRAPETALA 2 (ULT2); FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Developmental regulator, ULTRAPETALA (InterPro:IPR020533), SAND domain (InterPro:IPR000770); BEST Arabidopsis thaliana protein match is: Developmental regulator, ULTRAPETALA (TAIR:AT4G28190.1); Has 46 Blast hits to 46 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr2:-:8965845..8966795 | ||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 26099.00 Da | ||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 7.58 | ||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.60 | ||||||||||||||||||||||||||||||||||||||||||||
Length | 228 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MERECGSKEL FSKEELQEIS GVHVGDDYVE VMCGCTSHRY GDAVARLKIF SDGELQITCQ CTPACLEDKL TPAAFEKHSE RETSRNWRNN VWVFIEGDKV 101: PLSKTVLLRY YNKALKNSNV SKVIHRDEFV GCSTCGKERR FRLRSRGECR MHHDAIAEPN WKCCDYPYDK ITCEEEEERG SRKVFRGCTR SPSCKGCTSC 201: VCFGCKLCRF SDCNCQTCLD FTTNAKPI |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)