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AT2G04830.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.984
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : Protein of unknown function (DUF295)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein of unknown function (DUF295); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF295) (TAIR:AT2G04840.1); Has 68 Blast hits to 68 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 68; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
DNASU:815027EMBL:AC006955EMBL:AY227639EMBL:BT024661
EMBL:CP002685EnsemblPlants:AT2G04830EnsemblPlants:AT2G04830.1entrez:815027
GeneID:815027Gramene:AT2G04830.1hmmpanther:PTHR20995hmmpanther:PTHR20995:SF21
InterPro:IPR005174KEGG:ath:AT2G04830Pfam:PF03478PhylomeDB:Q9SJ76
PIR:A84462Proteomes:UP000006548RefSeq:NP_178560.1TAIR:AT2G04830
UniGene:At.41257UniProt:Q9SJ76
Coordinates (TAIR10) chr2:+:1695431..1695733
Molecular Weight (calculated) 11738.80 Da
IEP (calculated) 4.81
GRAVY (calculated) -0.36
Length 100 amino acids
Sequence (TAIR10)
(BLAST)
1: MNLESYKWER VYSIGDEMLI FGRGVTVPLA LKDLGHGIKS DSIYFVDDED VWPDHKDWPD YKDHVSNCGV FDIATSKIEW PKKIYFSVNK TQWFVWGVAY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)