AT1G75920.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:vacuole 0.904 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : GDSL-like Lipase/Acylhydrolase superfamily protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
GDSL-like Lipase/Acylhydrolase superfamily protein; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: extracellular lipase 4 (TAIR:AT1G75910.1); Has 3181 Blast hits to 3145 proteins in 149 species: Archae - 0; Bacteria - 161; Metazoa - 0; Fungi - 26; Plants - 2987; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:28505591..28507023 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 39257.00 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 10.06 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.04 | ||||||||||||||||||||||||||||
| Length | 353 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MLVLALFSIY FLSIEAVRNE SFPALLAFGD SMVDTGNNNY LLTLMKGNYW PYGWNFDSKI PTGRFGNGRV FSDVVGIILK SSLQCFFVIS AEGLGIKRIV 101: PAYRKLYIAP SDLKTGVSFA SGGAGVDPVT SKLLRVLSPA DQVKDFKGYK RKLKGVVGRS KAKKIVANSV ILVSEGNNDI GITYAIHDAG MRLMTPKVYT 201: SKLVGWNKKF IKDLYDHGAR KFAVMGVIPL GCLPMSRLIF GGFFVWCNFL ANTISEDYNK KLKSGIKSWR GASDFRGARF VYVDMYNSLM DVINNHRKYG 301: FTHEKNGCCC MLTAIVPCSN PDKYVFYDFA HPSEKAYKTI AKKLVEDIKT GLA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)