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AT1G73177.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
nucleus 0.918
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : bonsai
Curator
Summary (TAIR10)
The BONSAI gene encodes a protein with similarity to the APC13 component of the Anaphase Promoting Complex. Plants with lowered level of BONSAI expression, resulting from hypomethylation, RNAi knock-down, or a T-DNA insertion show some abnormalities in shoot and inflorescence development.
Computational
Description (TAIR10)
BONSAI (BNS); Has 44 Blast hits to 44 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Protein Annotations
EMBL:AY088589EMBL:BT025015EMBL:CP002684EnsemblPlants:AT1G73177
EnsemblPlants:AT1G73177.1entrez:843651GeneID:843651GO:GO:0005680
GO:GO:0010229GO:GO:0048827Gramene:AT1G73177.1hmmpanther:PTHR28672
hmmpanther:PTHR28672:SF1HOGENOM:HOG000220858KEGG:ath:AT1G73177KO:K12456
OMA:DSNQETQProteomes:UP000006548RefSeq:NP_565057.1STRING:3702.AT1G73177.1
TAIR:AT1G73177tair10-symbols:BNSUniGene:At.35022UniProt:Q8L981
Coordinates (TAIR10) chr1:-:27516721..27517352
Molecular Weight (calculated) 7145.19 Da
IEP (calculated) 3.37
GRAVY (calculated) -0.58
Length 63 amino acids
Sequence (TAIR10)
(BLAST)
1: MAEVSLGMLI DIVDEEWMRD TLPDDDLPLP PVLAVKTDDT EETNQETQQA DAETWRDLAL DTQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)