AT1G66570.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plasma membrane 0.888 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : sucrose-proton symporter 7 | ||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
sucrose-proton symporter 7 (SUC7); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity, sucrose:hydrogen symporter activity; INVOLVED IN: transport, sucrose transport, transmembrane transport; LOCATED IN: integral to membrane, integral to plasma membrane, membrane; EXPRESSED IN: sepal, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Sucrose/H+ symporter, plant (InterPro:IPR005989), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: sucrose-proton symporter 8 (TAIR:AT2G14670.1); Has 2213 Blast hits to 2104 proteins in 564 species: Archae - 35; Bacteria - 844; Metazoa - 403; Fungi - 190; Plants - 433; Viruses - 0; Other Eukaryotes - 308 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr1:-:24835309..24837242 | ||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 52876.30 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 9.29 | ||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | 0.53 | ||||||||||||||||||||||||||||||||||||||||||||||||
Length | 491 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MSDLQANKDE TTVDRQSSSS VDLDGPSPLR KMISVASIAA GIQFGWALQL SLLTPYVQLL GVPHKWPSFI WLCGPVSGLL VQPSVGYFSD RCTSRFGRRR 101: PFIATGALLV AVSVVLIGYA ADFGHSMGDK IDKPVKMRAV VIFALGFWIL DVANNTLQGP CRAFLGDLAA GDAQKTRTAN AFFSFFMAVG NVLGYAAGSY 201: TNLYKIFPFT MTKACDIYCA NLKSCFFLSI TLLLVVTIIA LWYVEDKQWS PKADSDNEKT PFFGEIFGAF KVMKRPMWML LIVTALNWIA WFPFLLYDTD 301: WMGREVYGGD SKGDDKMKKL YNQGIHVGAL GLMLNSIVLG VMSLGIEGIS RKMGGAKRLW GAVNIILAVC LAMTVLVTKK AEEHRRIAGP MALPTDGIRA 401: GALTLFALLG IPLAITFSIP FALASIISSS SGAGQRLSLG VLNMAIVIPQ MIVSFGVGPI DALFGDGNLP GFVVGAIAAA VSSIVAFTVL P |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)