suba logo
AT1G66570.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
plasma membrane 0.888
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : sucrose-proton symporter 7
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
sucrose-proton symporter 7 (SUC7); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity, sucrose:hydrogen symporter activity; INVOLVED IN: transport, sucrose transport, transmembrane transport; LOCATED IN: integral to membrane, integral to plasma membrane, membrane; EXPRESSED IN: sepal, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Sucrose/H+ symporter, plant (InterPro:IPR005989), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: sucrose-proton symporter 8 (TAIR:AT2G14670.1); Has 2213 Blast hits to 2104 proteins in 564 species: Archae - 35; Bacteria - 844; Metazoa - 403; Fungi - 190; Plants - 433; Viruses - 0; Other Eukaryotes - 308 (source: NCBI BLink).
Protein Annotations
BioGrid:28196eggNOG:ENOG410XPTReggNOG:KOG0637EMBL:AC074025
EMBL:AC079285EMBL:AK176510EMBL:BT029186EMBL:CP002684
EnsemblPlants:AT1G66570EnsemblPlants:AT1G66570.1entrez:842975ExpressionAtlas:Q67YF8
GeneID:842975Genevisible:Q67YF8GO:GO:0005887GO:GO:0005985
GO:GO:0008515GO:GO:0015293hmmpanther:PTHR19432hmmpanther:PTHR19432:SF38
HOGENOM:HOG000239187InParanoid:Q67YF8InterPro:IPR005989InterPro:IPR020846
OMA:NTNIVIFPaxDb:Q67YF8Pfam:Q67YF8PhylomeDB:Q67YF8
PIR:E96691PRIDE:Q67YF8PRO:PR:Q67YF8ProteinModelPortal:Q67YF8
Proteomes:UP000006548RefSeq:NP_176830.1SMR:Q67YF8STRING:3702.AT1G66570.1
SUPFAM:SSF103473TAIR:AT1G66570tair10-symbols:ATSUC7tair10-symbols:SUC7
TIGRfam:TIGR01301TIGRFAMs:TIGR01301TMHMM:TMhelixUniGene:At.50802
UniPathway:UPA00238UniProt:Q67YF8
Coordinates (TAIR10) chr1:-:24835309..24837242
Molecular Weight (calculated) 52876.30 Da
IEP (calculated) 9.29
GRAVY (calculated) 0.53
Length 491 amino acids
Sequence (TAIR10)
(BLAST)
001: MSDLQANKDE TTVDRQSSSS VDLDGPSPLR KMISVASIAA GIQFGWALQL SLLTPYVQLL GVPHKWPSFI WLCGPVSGLL VQPSVGYFSD RCTSRFGRRR
101: PFIATGALLV AVSVVLIGYA ADFGHSMGDK IDKPVKMRAV VIFALGFWIL DVANNTLQGP CRAFLGDLAA GDAQKTRTAN AFFSFFMAVG NVLGYAAGSY
201: TNLYKIFPFT MTKACDIYCA NLKSCFFLSI TLLLVVTIIA LWYVEDKQWS PKADSDNEKT PFFGEIFGAF KVMKRPMWML LIVTALNWIA WFPFLLYDTD
301: WMGREVYGGD SKGDDKMKKL YNQGIHVGAL GLMLNSIVLG VMSLGIEGIS RKMGGAKRLW GAVNIILAVC LAMTVLVTKK AEEHRRIAGP MALPTDGIRA
401: GALTLFALLG IPLAITFSIP FALASIISSS SGAGQRLSLG VLNMAIVIPQ MIVSFGVGPI DALFGDGNLP GFVVGAIAAA VSSIVAFTVL P
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)