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AT1G66380.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding : myb domain protein 114
Curator
Summary (TAIR10)
Encodes a member of the MYB family of transcription factors. Involved in regulation of anthocyanin biosynthesis. Affects the expression of enzymes involved in later steps of anthocyanin biosynthesis
Computational
Description (TAIR10)
myb domain protein 114 (MYB114); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: production of anthocyanin pigment 1 (TAIR:AT1G56650.1); Has 8855 Blast hits to 8248 proteins in 550 species: Archae - 0; Bacteria - 0; Metazoa - 795; Fungi - 489; Plants - 5874; Viruses - 3; Other Eukaryotes - 1694 (source: NCBI BLink).
Protein Annotations
BioGrid:28177eggNOG:COG5147eggNOG:KOG0048EMBL:AC020665
EMBL:AY008379EMBL:AY519567EMBL:CP002684EMBL:DQ446401
EMBL:DQ652916EnsemblPlants:AT1G66380EnsemblPlants:AT1G66380.1entrez:842956
Gene3D:1.10.10.60GeneID:842956Genevisible:Q9FNV8GO:GO:0003677
GO:GO:0003700GO:GO:0005634GO:GO:0006351GO:GO:0007275
GO:GO:0009753GO:GO:0031540Gramene:AT1G66380.1hmmpanther:PTHR10641
hmmpanther:PTHR10641:SF526HOGENOM:HOG000237600InParanoid:Q9FNV8IntAct:Q9FNV8
InterPro:IPR001005InterPro:IPR009057InterPro:IPR017930KEGG:ath:AT1G66380
KO:K09422OMA:ESTCSANPaxDb:Q9FNV8Pfam:PF00249
Pfam:Q9FNV8Pfscan:PS51294PhylomeDB:Q9FNV8PIR:B96689
PRO:PR:Q9FNV8PROSITE:PS51294ProteinModelPortal:Q9FNV8Proteomes:UP000006548
RefSeq:NP_176812.1SMART:SM00717SMR:Q9FNV8STRING:3702.AT1G66380.1
SUPFAM:SSF46689TAIR:AT1G66380tair10-symbols:AtMYB114tair10-symbols:MYB114
UniGene:At.16917UniProt:Q9FNV8
Coordinates (TAIR10) chr1:+:24757413..24758490
Molecular Weight (calculated) 16007.60 Da
IEP (calculated) 10.92
GRAVY (calculated) -0.70
Length 139 amino acids
Sequence (TAIR10)
(BLAST)
001: MEGSSKGLRK GAWTAEEDSL LRQCIGKYGE GKWHQVPLRA GLNRCRKSCR LRWLNYLKPS IKRGKFSSDE VDLLLRLHKL LGNRWSLIAG RLPGRTANDV
101: KNYWNTHLSK KHEPCCKTKI KRINIITPPN TPAQKVDIF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)