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AT1G63580.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
ASURE: plasma membrane
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : Receptor-like protein kinase-related family protein
Curator
Summary (TAIR10)
Encodes a plasma membrane-localized protein with two DUF26 domains and a GPI anchor domain.
Computational
Description (TAIR10)
Receptor-like protein kinase-related family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF26 (InterPro:IPR002902); BEST Arabidopsis thaliana protein match is: Receptor-like protein kinase-related family protein (TAIR:AT1G63590.1); Has 1351 Blast hits to 1292 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1351; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
BioGrid:27884eggNOG:ENOG410JVMXeggNOG:ENOG41105S5EMBL:AC008047
EMBL:CP002684EnsemblPlants:AT1G63580EnsemblPlants:AT1G63580.1entrez:842663
GeneID:842663Genevisible:Q9SH42GO:GO:0005576GO:GO:0005886
GO:GO:0031225Gramene:AT1G63580.1hmmpanther:PTHR32099hmmpanther:PTHR32099:SF4
HOGENOM:HOG000111976InParanoid:Q9SH42InterPro:IPR002902KEGG:ath:AT1G63580
OMA:CIGNISKPaxDb:Q9SH42Pfam:PF01657Pfam:Q9SH42
Pfscan:PS51473PhylomeDB:Q9SH42PIR:H96660PRIDE:Q9SH42
PRO:PR:Q9SH42PROSITE:PS51473ProteinModelPortal:Q9SH42Proteomes:UP000006548
RefSeq:NP_176546.1SMR:Q9SH42STRING:3702.AT1G63580.1TAIR:AT1G63580
UniGene:At.52347UniProt:Q9SH42
Coordinates (TAIR10) chr1:+:23577333..23578254
Molecular Weight (calculated) 30351.90 Da
IEP (calculated) 4.47
GRAVY (calculated) -0.05
Length 273 amino acids
Sequence (TAIR10)
(BLAST)
001: MTRIIDVSLF CFFLFSLGAM SQPSQNLTDC NQFPDTYQSN RNTVLSTLRN HSSLGSYYFN ATAGLSPNTV YGMFLCIGNI SKTSCSNCVH SATLEMDKSC
101: ESHDTSFMFS DECMVRYSDN SFFSLVEDSP ATFSYSQNDS LSYPQFYNQT LPGKLDELIL KAPSSFSSPV PYFVEDKEHV TQVEGSYDLE AMAQCSPDLD
201: PSSCTVCLGL VVEKFSECCS QSRWARIHFP KCLLRYDISA LQPNLTSLGV TTKGDDIFGR TFIAIMIGLL MGL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)