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AT1G60350.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : NAC domain containing protein 24
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
NAC domain containing protein 24 (NAC024); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT1G60300.1); Has 1779 Blast hits to 1735 proteins in 70 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1779; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:AB493512EMBL:AC004473EMBL:CP002684EnsemblPlants:AT1G60350
EnsemblPlants:AT1G60350.1entrez:842330GeneID:842330GO:GO:0003677
GO:GO:0003700GO:GO:0005634GO:GO:0006351GO:GO:0006355
Gramene:AT1G60350.1hmmpanther:PTHR31124hmmpanther:PTHR31124:SF3HOGENOM:HOG000115140
InterPro:IPR003441KEGG:ath:AT1G60350OMA:EKERYFCPfam:PF02365
Pfscan:PS51005PhylomeDB:O80756PIR:T02285PROSITE:PS51005
Proteomes:UP000006548RefSeq:NP_176238.1SMR:O80756SUPFAM:SSF101941
TAIR:AT1G60350tair10-symbols:anac024tair10-symbols:NAC024UniGene:At.66061
UniProt:O80756
Coordinates (TAIR10) chr1:-:22241273..22242235
Molecular Weight (calculated) 37385.80 Da
IEP (calculated) 7.62
GRAVY (calculated) -0.47
Length 320 amino acids
Sequence (TAIR10)
(BLAST)
001: MEEDAAFDLL KAELLNAEDD AIISRYLKRM VVNGDSWPDH FIEDADVFNK NPNVEFDAES PSFVIVKPRT EACGKTDGCE TGCWRIMGRD KPIKSTETVK
101: IQGFKKILKF CLKRKPRGYK RSWVMEEYRL TNNLNWKQDH VICKIRFMFE AEISFLLAKH FYTTSESLPR NELLPAYGFL SSDKQLEDVS YPVTIMTSEG
201: NDWPSYVTNN VYCLHPLELV DLQDRMFNDY GTCIFANKTC GKTDRCINGG YWKILHRDRL IKSKSGIVIG FKKVFKFHET EKERYFCGGE DVKVTWTLEE
301: YRLSVKQNKF LCVIKFTYDN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)