AT1G57760.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
|
||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : Protein of unknown function (DUF784) | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a ECA1 gametogenesis related family protein | ||||||||||||||||||||||||
| Computational Description (TAIR10) |
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF784, Arabidopsis thaliana (InterPro:IPR008502); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF784) (TAIR:AT1G45223.1); Has 129 Blast hits to 127 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||
| Coordinates (TAIR10) | chr1:+:21390082..21390429 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 12738.60 Da | ||||||||||||||||||||||||
| IEP (calculated) | 7.75 | ||||||||||||||||||||||||
| GRAVY (calculated) | 0.35 | ||||||||||||||||||||||||
| Length | 115 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAKLSSHVTA LFIVATLVCA FIPVISVEEA EAKSLWNTCL VKITPKCALN IIYVVFGNGT LIESCCHDLV QEGKVCHDNL IKYIADRPSL IGRETQYLKK 101: RDDVWSHCVS ISKTA |
||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)