AT1G50820.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Aminotransferase-like, plant mobile domain family protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Aminotransferase-like, plant mobile domain family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Aminotransferase-like, plant mobile domain (InterPro:IPR019557); BEST Arabidopsis thaliana protein match is: Plant mobile domain protein family (TAIR:AT1G50790.1); Has 564 Blast hits to 557 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 564; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:18833275..18834861 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 60471.80 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 9.28 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.33 | ||||||||||||||||||||||||||||
| Length | 528 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MASRTENSSS KRTHLSKPCL SSSIDGFEDC QNRSSALSVH LKALSTSIKF WGWRFPNKKF KSWARKMASL HEPIWRKAGI FEAVIASTYK IPKDTDLVLG 101: LAEKWCPDTK TFIFPWGEAT ITLEDVMVLL GFSVLGLPVF ATVDSSGKEI MAKLEKEWKK IKNDKVCLVT KLAWMERFMN SGDELEHVGF LVLWLSYFAF 201: PSHLFHISEA ILPVAVHLSS GTKMALAPAV LAHLYADLSL LQGHIRVFSE SLIKVQLDLN ALFKLVQVWA WERFRELQLK PFSLLRGEPR LARWCDMKQS 301: TSNAWRIFNN SKMDSFEWRP YTKTVKNWDF PRFYPERAMR VPVGPNLDDE FISFARCIKV SELVGIDSVE HYFPNRVASQ FGMRQDVHCP VNQKKLSRDA 401: AWNDYDKPID GLTIYIPSRS AISCVTPMCE PQRKGFVESD ETLKSRTIIG DDTSFVTSGS KMNRTSEDEM KIAENSTNKR RKYMKQAHRG TMGLCQKQVP 501: SDNDEDDDSL TVSQVTVRYK KKYSDIKC |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)