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AT1G29230.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.944
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding : CBL-interacting protein kinase 18
Curator
Summary (TAIR10)
Encodes a member of the SNF1-related kinase (SnRK) gene family (SnRK3.20), which has also been reported as a member of the CBL-interacting protein kinases (CIPK18).
Computational
Description (TAIR10)
CBL-interacting protein kinase 18 (CIPK18); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: signal transduction, protein amino acid phosphorylation; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 13 (TAIR:AT2G34180.1); Has 130390 Blast hits to 128434 proteins in 4358 species: Archae - 171; Bacteria - 15341; Metazoa - 47757; Fungi - 13139; Plants - 31666; Viruses - 518; Other Eukaryotes - 21798 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G29230-MONOMERBioGrid:25032EC:2.7.11.1eggNOG:COG0515
eggNOG:KOG0583EMBL:AC021043EMBL:AY034099EMBL:CP002684
EnsemblPlants:AT1G29230EnsemblPlants:AT1G29230.1entrez:839797GeneID:839797
Genevisible:Q9LP51GO:GO:0004674GO:GO:0005524GO:GO:0007165
Gramene:AT1G29230.1hmmpanther:PTHR24347hmmpanther:PTHR24347:SF168HOGENOM:HOG000233016
InParanoid:Q9LP51IntAct:Q9LP51InterPro:IPR000719InterPro:IPR004041
InterPro:IPR008271InterPro:IPR011009InterPro:IPR017441InterPro:IPR018451
InterPro:IPR020636KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:ath:AT1G29230
OMA:PRNNILMPANTHER:PTHR24347PaxDb:Q9LP51Pfam:PF00069
Pfam:PF03822Pfam:Q9LP51Pfscan:PS50011Pfscan:PS50816
PhylomeDB:Q9LP51PIR:G86414PRIDE:Q9LP51PRO:PR:Q9LP51
PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011PROSITE:PS50816
ProteinModelPortal:Q9LP51Proteomes:UP000006548RefSeq:NP_174217.1scanprosite:PS00107
scanprosite:PS00108SMART:SM00220SMR:Q9LP51STRING:3702.AT1G29230.1
SUPFAM:SSF56112TAIR:AT1G29230tair10-symbols:ATCIPK18tair10-symbols:ATWL1
tair10-symbols:CIPK18tair10-symbols:SnRK3.20tair10-symbols:WL1UniGene:At.15802
UniProt:Q9LP51
Coordinates (TAIR10) chr1:+:10214860..10216422
Molecular Weight (calculated) 58545.80 Da
IEP (calculated) 7.79
GRAVY (calculated) -0.30
Length 520 amino acids
Sequence (TAIR10)
(BLAST)
001: MAQALAQPPL VVTTVVPDPP PPPPPPHPKP YALRYMADLL GRIGIMDTDK DGNISPQSPR SPRSPRNNIL MGKYELGKLL GHGTFAKVYL AQNIKSGDKV
101: AIKVIDKEKI MKSGLVAHIK REISILRRVR HPYIVHLFEV MATKSKIYFV MEYVGGGELF NTVAKGRLPE ETARRYFQQL ISSVSFCHGR GVYHRDLKPE
201: NLLLDNKGNL KVSDFGLSAV AEQLRQDGLC HTFCGTPAYI APEVLTRKGY DAAKADVWSC GVILFVLMAG HIPFYDKNIM VMYKKIYKGE FRCPRWFSSD
301: LVRLLTRLLD TNPDTRITIP EIMKNRWFKK GFKHVKFYIE DDKLCREDED EEEEASSSGR SSTVSESDAE FDVKRMGIGS MPRPSSLNAF DIISFSSGFD
401: LSGLFEEEGG EGTRFVSGAP VSKIISKLEE IAKIVSFTVR KKEWSLRLEG CREGAKGPLT IAAEIFELTP SLVVVEVKKK GGDREEYEEF CNKELRPELE
501: KLIHEEVVVE EALYLPSDTE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)