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AT1G16916.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 0.372
vacuole 0.235
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J6V8eggNOG:ENOG41114IWEMBL:CP002684EnsemblPlants:AT1G16916
EnsemblPlants:AT1G16916.1entrez:6241479GeneID:6241479GO:GO:0016021
Gramene:AT1G16916.1HOGENOM:HOG000005772InParanoid:B3H6R5iPTMnet:B3H6R5
KEGG:ath:AT1G16916OMA:INKWREMPaxDb:B3H6R5PhylomeDB:B3H6R5
Proteomes:UP000006548RefSeq:NP_001117299.1TAIR:AT1G16916TMHMM:TMhelix
UniGene:At.47889UniProt:B3H6R5
Coordinates (TAIR10) chr1:-:5786762..5787047
Molecular Weight (calculated) 7503.27 Da
IEP (calculated) 9.28
GRAVY (calculated) -0.56
Length 65 amino acids
Sequence (TAIR10)
(BLAST)
1: MMEEGPPAPK MLRMVYFVGA GFLCTFAINK WREMERNSLL KQEQEKNQQG DVGLLPRDSV QKAMK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)