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AT5G03920.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.986
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G03930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
DNASU:830271EMBL:CP002688EnsemblPlants:AT5G03920EnsemblPlants:AT5G03920.1
entrez:830271GeneID:830271Gramene:AT5G03920.1KEGG:ath:AT5G03920
OMA:MEKSPVVPaxDb:F4KI28PRIDE:F4KI28Proteomes:UP000006548
RefSeq:NP_196012.2STRING:3702.AT5G03920.1TAIR:AT5G03920UniGene:At.50426
UniProt:F4KI28
Coordinates (TAIR10) chr5:+:1058157..1058681
Molecular Weight (calculated) 20086.20 Da
IEP (calculated) 4.95
GRAVY (calculated) -0.35
Length 174 amino acids
Sequence (TAIR10)
(BLAST)
001: MEKSPVVMAE EGEHSGAKEL PKPKISMSDL TFVIGVYTTK SKKLTVVEFG ADREFNPNDR FKIEIVDLSR FELPKSGMDD VMITWEVVYK KDWQNIVTIV
101: KGRRSLDTNL RWLFNDLLAP EDLIRRGLTG DVKVSLNGDL LDKISLEIFI ESDQRYFSPE DTLRYLQCFF PSKN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)