AT4G21323.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 0.801 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Subtilase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Subtilase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, pollen tube growth; LOCATED IN: endomembrane system; EXPRESSED IN: pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Peptidase S8, subtilisin-related (InterPro:IPR015500); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT4G10550.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:11342494..11345632 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 86543.20 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.82 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.08 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 803 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MIQTLKTDSS FRLCFAAIAF GFVFIMNGKL SSGTTPHEAD PPQASNLALS PEAAPPDTAM DDASGINFGP LPPFVPEFPV YIFYLGERKH DDPNLVTQSH 101: LEILKSVLGS EEATNKSMVY SYHHGFSGFA AKLKPAEAEK LKKHPEVIIL LENRKLGLQT TRTWDYLGQF STPTSSKSLL HETNMGSGAI IGVIDSGIWS 201: ESGSFDDDGY GPIPKHWKGQ CVSADQFSPA DCNKKLIGAK YYIDGLNADL ETSINSTTEY LSPRDHNGHG TQVSSTAAGS FVSNMTLLGL SSGSIMRGGA 301: PKAHIAMYKA CWDVEGGMCS VADVWKAFDE AIHDGVDVLS VSVGGSALKT LDVEIDIAIP ALHAVNKGIP VVSPAGNEGS RSSSVINVSP WILTVAATTL 401: DRSFSTLITL ENNKTYLGQS LYTGPEISFT DVICTGDHSN VDQITKGKVI MHFSMGPVRP LTPDVVQKNG GIGLIYVRNP GDSRVECPVN FPCIYLDMEV 501: GSELYTYIQT RSSMKIKISP YKTIIGESVA SKVAKSSARG PSSFSPAILK PDIAAPGLTL LTPRIPTDED TREFVYSGTS MATPVIAGIV ALLKISHPNW 601: SPAVIKSALV TTAMKTDPYG ERLTVDGGNY KVADAFDYGG GLVNLEKATD PGLVYDMDIN DYTHYLCSQT LYTDKKVSAL TGNVNNKCPS SSSSILDLNV 701: PSITIPDLKG TVNVTRTVTN VGRVKSVYKP VIEAPFGFNV VVSPKKLKFN KTRNKLAFTV TVSPGSHRVN TAFYFGSLTW SDKVHNVTIP ISLRTRFIDN 801: FFL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)