AT3G17230.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 0.998 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : invertase/pectin methylesterase inhibitor family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
invertase/pectin methylesterase inhibitor family protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: shoot apex, embryo, sepal, pedicel; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT3G17225.1); Has 175 Blast hits to 123 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 175; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:5886381..5889236 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 38502.50 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.72 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.10 | ||||||||||||||||||||||||||||||||||||
| Length | 351 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAYPCVKRNV FSLLPLLVLL SITPLSSSLS PSDKITKDLL QQLCASPHID HPFCITWLTA DPTTFTLDLQ GLLDLVFQKT QLLGYKSLAA MKGAVRTTTD 101: PTLRTSYETC VRDYEGAIKA IEEAQGSVTS KAYQLASQGA AKAFVSISVC EAQFEGRDDV PPKTMAYPCV KRNVSSLLPL LVLLSITPFS SSLSPSDKVT 201: NETLNQLCSK PNIYNHFCIA WLTSDPTTFT LDLQGLLDSV FQKTQLLGYK SLAAMKGSVN TTTDPALKIP FETCVTDYEV AIKAIEEAQG FVTSKAYDLA 301: SLGAAKAFIS ISVCETQFEG RDNVPVYVTK LNMFFKRMCN IDRVFSDVLR T |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)