AT2G32740.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 0.383 vacuole 0.367 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : galactosyltransferase 13 | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
galactosyltransferase 13 (GT13); FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G32750.1); Has 586 Blast hits to 585 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 4; Plants - 557; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:13886826..13888232 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 54840.00 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.27 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.48 | ||||||||||||||||||||||||||||||||||||
| Length | 468 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDKFNPKKEK TVKKRALKVL TEISPTPLFS MLFLLHISQI ATYLSLSDKE TLNITVKTKQ GGTDTCAGRY VYMHNLPSRF NEDLIKSCEA YIELRNKCKY 101: LINSGFGPRI LEEDHNHTTR VLTIETGSWY YTNQFMLEVI FREKMRHYEC LTNDSSLSSV VFVPFYAGFD VRRFWGYNVK LRDELGEDLA QWLRERPEWR 201: KMYGRDHFFV TGRVGRDFRR VTDQDSDWGN KLMRLPEFEN ITMLSIETNS RSNEFAVPYP TYFHPKSRTE VKRWQRQVTM MQRRYLFSFV GANRPKMEES 301: IRGEIIRQCL ASQGRCKFLD CDTSSKDCSD PVKVVEVFQD SVFCLQPPGD TPTRRSTFDS ILAGCIPVFF SVDSVYNQYK WYFPKDRTKY SVYIAEEGVK 401: KGKVSIEKLL ANVSEEKISR MRNEVEKIIP KIIYTKPGEV GPEKIEDAFE IAVARVLERV SLFKMTRI |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)