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AT1G60760.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 0.993
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : Plant invertase/pectin methylesterase inhibitor superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT1G10770.1); Has 33 Blast hits to 33 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JSDReggNOG:ENOG41108WGEMBL:AC002292EMBL:CP002684
EnsemblPlants:AT1G60760EnsemblPlants:AT1G60760.1entrez:842370Gene3D:1.20.140.40
GeneID:842370GO:GO:0004857Gramene:AT1G60760.1HOGENOM:HOG000114068
InterPro:IPR006501KEGG:00040+3.1.1.11KEGG:00500+3.1.1.11KEGG:ath:AT1G60760
OMA:DSHQVNTPfam:PF04043PhylomeDB:O22713PIR:A96633
Proteomes:UP000006548RefSeq:NP_176275.1SMART:SM00856SUPFAM:SSF101148
TAIR:AT1G60760TMHMM:TMhelixUniGene:At.66066unipathway:UPA00545
UniProt:O22713
Coordinates (TAIR10) chr1:+:22365832..22366323
Molecular Weight (calculated) 17942.10 Da
IEP (calculated) 10.62
GRAVY (calculated) 0.12
Length 163 amino acids
Sequence (TAIR10)
(BLAST)
001: MASRNTIQMY LTTVVAIVIL LAASQATEAR FTSLCAQTAY PTLCRPLVKG PNPRRATHST IRALEAKTKL AITDSARFKS GNPTVAICYA TLVDASFNLR
101: RARTSIRKRN VMMLKMFLTA AVSDYGVCVN GFIDSHQVNT LQNDVDELRK MGTNCLLLAT LIR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)