AT1G54980.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:extracellular 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Plant invertase/pectin methylesterase inhibitor superfamily protein | ||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT5G50070.1); Has 38 Blast hits to 38 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr1:-:20507375..20508355 | ||||||||||||||||||||||||||||
Molecular Weight (calculated) | 19728.50 Da | ||||||||||||||||||||||||||||
IEP (calculated) | 7.90 | ||||||||||||||||||||||||||||
GRAVY (calculated) | 0.26 | ||||||||||||||||||||||||||||
Length | 180 amino acids | ||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MKKKILPITL QVAVLLQFLI VSASALTSTK YIDKLCEMQS VEDKTFCLQT LSANPLAASA TGLLPLAEVV IRGIDLPYAK LLVKSADRAI EKIPALKEQF 101: KECQDSFLRI VMSLKSAASE LKVSPDTANY DAMICFDETK RVKEVIGKNE DVTSKSLIEM TLRMEKLIFL ALGATEVVGG |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)