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AT1G53970.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.894
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 0 Blast hits to 0 proteins in 0 species (source: NCBI BLink).
Protein Annotations
EMBL:CP002684EnsemblPlants:AT1G53970EnsemblPlants:AT1G53970.1entrez:841835
GeneID:841835Gramene:AT1G53970.1KEGG:ath:AT1G53970PaxDb:Q3ECQ6
Proteomes:UP000006548RefSeq:NP_175799.1TAIR:AT1G53970UniGene:At.52189
UniProt:Q3ECQ6
Coordinates (TAIR10) chr1:+:20148527..20148752
Molecular Weight (calculated) 5497.50 Da
IEP (calculated) 5.49
GRAVY (calculated) -0.17
Length 50 amino acids
Sequence (TAIR10)
(BLAST)
1: MAETTTTSIL FPVFDLITGH TAKPLSNSLP EESPTDAQFL ISSRSMHGYR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)