AT1G34460.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.699 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : CYCLIN B1;5 | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
B1 type cyclin | ||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
CYCLIN B1;5 (CYCB1;5); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671); BEST Arabidopsis thaliana protein match is: Cyclin family protein (TAIR:AT5G06150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:12595110..12599628 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 55433.20 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.47 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.32 | ||||||||||||||||||||||||||||||||||||||||
| Length | 491 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAHYINIYGK RLFDIGLYLK TSVDLILQQQ HVLMSQQKFT DISLCHREAP NPKLDLPDDN RLSPLTELED IGQQSKTLGT AIHRKISEQK RVIESGSVAS 101: IVEHKRTNLS AIMATRANIP EQVRGAPLVD GLKIQNKNGA VKNRRALGDI GNLVSVPGVQ GGKAQPPINR PITLSFRAQL LANAQLERKP INGDNKVPAL 201: GPKSQPLAAR NPEAQRAVQK KNLVVKQQTK PVEVIETKRN AQSKAACGIV NKPKILDIDE SDKDNHVAAV EYVDDMYSFY KEVEKESQPK MYMHIQTEMN 301: EKMRAILIDW LLEVHIKFEL NLETLYLTVN IIDRFLYVKA VPKRELQVND LVYVTDNAYS SRQILVMKKA ILGNLEWYLT IPTQYVFLFC FIKASISDPE 401: VLHVQKKNLQ ASKTKSFSIQ VLSFSSHKSI VKSDQFCKKF NLCQEVTALA SEFHLGNCEA WRETVTKLKD PETKCLKVVF EYTASDACGY G |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)