AT1G33900.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.953 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding; INVOLVED IN: response to bacterium; CONTAINS InterPro DOMAIN/s: AIG1 (InterPro:IPR006703); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G33930.1); Has 1258 Blast hits to 1107 proteins in 117 species: Archae - 0; Bacteria - 93; Metazoa - 786; Fungi - 6; Plants - 257; Viruses - 8; Other Eukaryotes - 108 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:12311518..12313518 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 36398.80 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.98 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.33 | ||||||||||||||||||||||||||||||||
| Length | 326 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAGLEDTTDL RLPSASEPIK NIVLVGRTGN GKSATGNSLI GKQVFRSETR ATGVTMKCET CVAVTPCGTG INVIDTPGLF DLSVSAEYLS QEIINCLVLA 101: EDGLHAVVLV LSVRTRISQE EEATLNTLQV IFGSQIIDYL VVLFTGGDEL EANNMTLDDY LSKGCPEFLK TVLRLCGGRR ILFDNRTTDE GKKVKQVQEL 201: LAHVAAIEKS TSGIPFTDEM HRKIQKEAET LREQQKEVES KDLAAAEIEK WKKHYQTEHD KNMNMMAEML GNRLREDSER QEKMLLALRD NLEISQRQNK 301: LNELTDNEPD LIHCGVSLRR MPCNML |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)