AT5G64540.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; Has 2125 Blast hits to 1062 proteins in 182 species: Archae - 6; Bacteria - 116; Metazoa - 913; Fungi - 305; Plants - 50; Viruses - 20; Other Eukaryotes - 715 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:25798850..25800651 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 47259.50 Da | ||||||||||||||||||||||||
| IEP (calculated) | 9.41 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.78 | ||||||||||||||||||||||||
| Length | 424 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MMDKDEPFVY NEVDYKTPKQ SPQTWPMDKI RQSRFQHKMS SLLSPVTPKR NYNISNAKTL LLQCLRDAKS DPLPPRRFPV SCSDEGILMD GVLVTSATKK 101: KVYESPSSYP GRSARSSIFR SQLKKTTECS SPISDSGPNQ ETTRSQQSSS AGKENMLANS PCTPKAAKPF KLQASAEPFI LTPRQAASPY TPQQLPYDHY 201: SPQFPCANPL HLQLYPYLHR PRSLIYVYQR PPLFPLLPHG PDPYTLDSQK DFPPILSGNQ TPTTSSHSVP TTPSSSQLNT TTSDSPVHTP ISTTLTVDLN 301: TSTTTSTHSS SPSVDRLDTV AQIPDLSSSP SDGLETMTQK PDLASPSAGR ETETQKPGLA LPSAGLRTMT RNKDWSPSDD GLPTFTQDQL VFMKSHNRLF 401: PDYVFGRYKY KKRMSAFRHQ EEHQ |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)