AT5G36690.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
AT5G36690 and AT5G36780 represent identical copies. The duplication within clone F27C7 is believed an artifact with only one true copy existing. | ||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G36780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:14415185..14417288 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 66455.10 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.27 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.70 | ||||||||||||||||||||||||||||||||||||||||
| Length | 576 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDEQIIFCDG FEVVPSPEIN DLILYECDQS LTNSEVTTDE EEDTIFSGGD SSSGLAAEED SSGDKPLSFY IVKQPVYDNP EIKAKIDEAN QEIFRCNELR 101: INVLSAKKSE LAEVSSLYTQ MESLVPQSEG YRMVIEEKKK EFDTLLEALR NLRCTTSDQL CFTKEELDHL SYIAQYQIEY GSIGLEEEDW MLKETEKPDG 201: IILSEKEASI NRVKSMALEL NEVKNELDAI TWKINDLSDK LWKSQNNIRV LDLEKAHILE KRDRFYARIK MLRIQRDKGN AAFFQSLSVM CKAKELAASG 301: NVRELEVFAS SEVDRFMTLW NDDKAFREDY VRRISHSLCE RELNEDGRIK DADLQIFWEK KVPVKTIKRS EKVHKMNRED SSSNSSEDGN VITDKRKKET 401: KSDVIVYEKP KKKEEEIDEE ALKERKREEQ LEKARLVMER KRKLQEKAAA KAAIRAQKEA EKKLKAIILS CSHFFNECEK KAKKKAAANS TSPSESDQVI 501: NDEKVRTLAV SGKEKHQKER LLFPKQRSFR YKHRGSGTEA LPKAILNRRK ARRYWVWGLS SAALAVSLVL VVLLLR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)