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AT5G35760.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Beta-galactosidase related protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Beta-galactosidase related protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35 (InterPro:IPR001944); BEST Arabidopsis thaliana protein match is: Beta-galactosidase related protein (TAIR:AT5G01080.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
EMBL:CP002688EnsemblPlants:AT5G35760EnsemblPlants:AT5G35760.1entrez:833555GeneID:833555Gramene:AT5G35760.1KEGG:ath:AT5G35760
PaxDb:F4K1E9PRIDE:F4K1E9Proteomes:UP000006548RefSeq:NP_198425.1TAIR:AT5G35760UniGene:At.55143UniProt:F4K1E9
Coordinates (TAIR10) chr5:+:13934108..13934782
Molecular Weight (calculated) 19775.20 Da
IEP (calculated) 10.50
GRAVY (calculated) -0.27
Length 177 amino acids
Sequence (TAIR10)
(BLAST)
001: MSKRVKKNAI MIPSPRSGGY RSFFNSLPPY PPITKLLQGI FKYTDKLQIC ESLAKSGVMI YPLFSPVEHL FKGSYALFAI AVYDHTLVED FAKPVFMVES
101: AKASTDFSNL VNFFKSEHLF AKLMKPLSSF SCKAIRLKSR RCGGEKLPPD TNGKSSTCGV AMQSRKGRST AKNERDK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)