AT5G22490.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 1.000 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : O-acyltransferase (WSD1-like) family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
O-acyltransferase (WSD1-like) family protein; CONTAINS InterPro DOMAIN/s: O-acyltransferase, WSD1, C-terminal (InterPro:IPR009721), O-acyltransferase, WSD1, N-terminal (InterPro:IPR004255); BEST Arabidopsis thaliana protein match is: O-acyltransferase (WSD1-like) family protein (TAIR:AT5G16350.1); Has 1311 Blast hits to 1297 proteins in 176 species: Archae - 4; Bacteria - 1046; Metazoa - 16; Fungi - 2; Plants - 219; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr5:-:7458943..7461049 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 54480.50 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.97 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.02 | ||||||||||||||||||||||||||||||||||||
| Length | 482 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEKKMKEEEE EPLSPMARAF QEPSIDCGIV IKFGCKTKIN PDVIVDSLKL NVFKHPRFCS LLDDDGTKWL RTDVVNVEEH VFVPDIDPKL TEEDVEWFVE 101: DYISSITMIP LDRTKPLWEV HILNAKTSDA EAICVIRCHH ALGDGVSILS LILASTRKTS EPEAFSTLPV PKCRESYNHR RGFSFFRLVL VVCSTVRLIW 201: NTLVDSFLCM ATIFFLKDTD TPLKGKPGAI KKFSHRIVSL DDIKLIKNAM EMTINDVLLG VTEAALTRYL HQSYDKTNEE AGTSLTPNRQ DLLDRIRLRS 301: LIVVNLRPTG SQSIADMMAK GSKCRWGNYI SVILFPFTIA LQSDPLVYLS NVKSMIDRKK NSLITYIIYT FSEFVIKAFG INVAVAFQRK IMLNTTMCIS 401: NLPGPTEEVS FHGHPIAYFA PSIYGLPQAL TIHYLSYANK MIISVAVDPM IIDAHKLCDE LEESLKNMKL AILEKGLPNH VN |
||||||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)