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AT3G63350.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : winged-helix DNA-binding transcription factor family protein
Curator
Summary (TAIR10)
member of Heat Stress Transcription Factor (Hsf) family
Computational
Description (TAIR10)
AT-HSFA7B; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to high light intensity, response to heat, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: root, pedicel, carpel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A7A (TAIR:AT3G51910.1); Has 2113 Blast hits to 2100 proteins in 228 species: Archae - 0; Bacteria - 6; Metazoa - 325; Fungi - 481; Plants - 785; Viruses - 0; Other Eukaryotes - 516 (source: NCBI BLink).
Protein Annotations
eggNOG:COG5169eggNOG:KOG0627EMBL:AL138648EMBL:CP002686EMBL:DQ446784EMBL:DQ653166EnsemblPlants:AT3G63350
EnsemblPlants:AT3G63350.1entrez:825510Gene3D:1.10.10.10GeneID:825510Genevisible:Q9M1V5GO:GO:0003700GO:GO:0005634
GO:GO:0005737GO:GO:0006351GO:GO:0009408GO:GO:0009644GO:GO:0043565Gramene:AT3G63350.1hmmpanther:PTHR10015
hmmpanther:PTHR10015:SF186HOGENOM:HOG000237979InParanoid:Q9M1V5InterPro:IPR000232InterPro:IPR011991InterPro:IPR027725KEGG:ath:AT3G63350
KO:K09419ncoils:CoilOMA:PNTNHIVPANTHER:PTHR10015PaxDb:Q9M1V5Pfam:PF00447Pfam:Q9M1V5
PhylomeDB:Q9M1V5PIR:T48124PRIDE:Q9M1V5PRINTS:PR00056PRO:PR:Q9M1V5PROSITE:PS00434ProteinModelPortal:Q9M1V5
Proteomes:UP000006548Reactome:R-ATH-3371453Reactome:R-ATH-3371511Reactome:R-ATH-3371568Reactome:R-ATH-3371571RefSeq:NP_191894.1scanprosite:PS00434
SMART:SM00415SMR:Q9M1V5STRING:3702.AT3G63350.1SUPFAM:SSF46785TAIR:AT3G63350tair10-symbols:AT-HSFA7Btair10-symbols:HSFA7B
UniGene:At.54047UniProt:Q9M1V5
Coordinates (TAIR10) chr3:+:23399468..23400812
Molecular Weight (calculated) 32625.50 Da
IEP (calculated) 4.87
GRAVY (calculated) -0.79
Length 282 amino acids
Sequence (TAIR10)
(BLAST)
001: MDPSSSSRAR SMPPPVPMEG LQEAGPSPFL TKTFEMVGDP NTNHIVSWNR GGISFVVWDP HSFSATILPL YFKHNNFSSF VRQLNTYGFR KIEAERWEFM
101: NEGFLMGQRD LLKSIKRRTS SSSPPSLNYS QSQPEAHDPG VELPQLREER HVLMMEISTL RQEEQRARGY VQAMEQRING AEKKQRHMMS FLRRAVENPS
201: LLQQIFEQKR DREEAAMIDQ AGLIKMEEVE HLSELEALAL EMQGYGRQRT DGVERELDDG FWEELLMNNE NSDEEEANVK QD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)