AT3G53640.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.890 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G13350.1); Has 89705 Blast hits to 87262 proteins in 2683 species: Archae - 129; Bacteria - 9303; Metazoa - 36199; Fungi - 12153; Plants - 13714; Viruses - 411; Other Eukaryotes - 17796 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:19887007..19888935 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 73101.20 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.64 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.79 | ||||||||||||||||||||||||||||||||||||||||
| Length | 642 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVSDKIVESS HRKHRRSYSP SDEVVKSSKR HKHHHHKHRH SHHLDEDGNE KNVYPFLGNP GNDGELDLEE GENLKKKGSI DRESNRDNYR GRSSRDKARS 101: SSRETGRENE RERRKDQDRD RGRREDQSDQ EIYKSGGDGY GEVRHDAEDD LDSLKSHKPN GETQGNVERS EVDNDDDGED VVWGVEEQEA AEMKRIEESK 201: RITQAILEKY KKKLEQSSTV ADVQAKAGLD TEAVDGEVAK LSSAVGETPA RLVISDSDMT LASAGSPKSD MFSDDIFGES PLADGTRKGN ALVPFVRSGL 301: NDNWDDAEGY YSYQLGELLD DRYEIMATHG KGVFSTVVRA KDTKPELGEP EEVAIKIIRK NETMHKAGQA EIRILKKLVC SDPENKHHCV RLLSTFEYRN 401: HLCLVFESLH LNLREVVKKI GVNIGLKLYD VRVYAEQLFI SLKHLKNCGV LHCDIKPDNI LMNEGRNMLK LCDFGSAMFA GENQVTPYLV SRFYRAPEII 501: LGLPYDHPLD IWSVGCCLYE LYSGKIMFPG STNNDMLRLH MELKGPFPKK MLRKGAFIDQ HFDKDLCFYA TEEDSVTGKT IRRIMVNVKP KDLGSVIRRR 601: YEDEDPKVLV HFRNLLDKIF TLDPQKRLTV SQALAHPFIT GK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)