AT3G18485.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.801 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : iaa-leucine resistant 2 | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a novel protein with no predicted membrane-spanning domains that is polymorphic among Arabidopsis accessions. The protein may modulate a metal transporter. Mutants are resistant to IAA-Leu, IAA-Phe, and the divalent metals cobalt and manganese but remain sensitive to free IAA; they are defective in lateral root formation and primary root elongation. | ||||||||||||||||||||||||
| Computational Description (TAIR10) |
IAA-LEUCINE RESISTANT 2 (ILR2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lateral root morphogenesis, auxin conjugate metabolic process, response to metal ion, root development; LOCATED IN: cytosol; Has 25 Blast hits to 25 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 18; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:6341918..6343178 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 43391.70 Da | ||||||||||||||||||||||||
| IEP (calculated) | 8.17 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.27 | ||||||||||||||||||||||||
| Length | 386 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MASESSTHKT KLEKKTCLSF LSSFTRSQIV YPTQGISHYY PSCHMMVHAM NITLCDNFDF KRANPNYHPY ILRLYCGVLF WIQCLRAGND VNDLTDVQHR 101: FLNRFLDNHP LETLAVPGPL LGLFKTLCSS QPEFPHNHNG KVYPRIPAQP GPARRDAFMR DLLESHFLPN VPGIFALLED LTAFLPNTSR LSKERQAHSR 201: YPKYPDQSLN EAFADCYSNF NFQVTSAADN LEKISSFLHM KHSMAWFNQV KGVADDVAAS FEGSGTLADC SPHGLVANQV MVVLSTPEHL PESPNCIADK 301: RATYEFGYQL KSTVRNLPPL AEALAAFSQT YIRMFPNHPF FGTFGSKTLD HGPFWKIRPI GSSLTDNSSY LTIPSIVKQA FKGPAT |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)